3D Virtual Pome Fruit Tissue Generation Based on Cell Growth Modeling

A 3D virtual fruit tissue generator is presented that can distinctly define the microstructural components of a fruit tissue and that can be used to model important physical processes such as gas transport during controlled atmosphere storage. The model is based on the biomechanics of plant cells in tissues. The main merit of this algorithm is that it can account for typical differences in intercellular air space networks and in cell size and shape found between different fruit species and tissues. The cell is considered as a closed thin walled structure, maintained in tension by turgor pressure. The cell walls of adjacent cells are modeled as parallel, linear elastic elements which obey Hooke's law. A 3D Voronoi tessellation is used to generate the initial topology of the cells. Intercellular air spaces of schizogenous origin are generated by separating the Voronoi cells along the edges where three Voronoi cells are in contact; while intercellular air spaces of lysigenous origin are generated by deleting (killing) some of the Voronoi cells randomly. Cell expansion then results from turgor pressure acting on the yielding cell wall material. To find the sequence of positions of each vertex and thus the shape of the tissue with time, a system of differential equations for the positions and velocities of each vertex is established and solved using a Matlab ordinary differential equation solver. Statistical comparison with synchrotron tomography images of fruit tissue is excellent. The virtual tissues can be used to study tissue mechanics and exchange processes of important metabolites.     

Injectable polyethylene glycol-laponite composite hydrogels as articular cartilage scaffolds with superior mechanical and rheological properties

In this study, injectable PEG-based hydrogels containing Laponite particles with mechanical and structural properties close to the natural articular cartilage are introduced. The nanocomposites are fabricated by imide ring opening reactions utilizing synthesized copolymers containing PEG blocks and nanoclay through a two-step thermal poly-(amic acid) process. Butane diamine is used as nucleophilic reagent and hydrogels with interconnected pores with sizes in the range of 100–250?µm are prepared. Improved viscoelastic properties compared with the conventional PEG hydrogels are shown. Evaluation of cell viability utilizing human mesenchymal stem cells determines cytocompatibility of the nanocomposite hydrogels.     

Two-Level Designs to Estimate All Main Effects and Two-Factor Interactions

We study the design of two-level experiments with N runs and n factors large enough to estimate the interaction model, which contains all the main effects and all the two-factor interactions. Yet, an effect hierarchy assumption suggests that main effect estimation should be given more prominence than the estimation of two-factor interactions. Orthogonal arrays (OAs) favor main effect estimation. However, complete enumeration becomes infeasible for cases relevant for practitioners. We develop a partial enumeration procedure for these cases and we establish upper bounds on the D-efficiency for the interaction model based on arrays that have not been generated by the partial enumeration. We also propose an optimal design procedure that favors main effect estimation. Designs created with this procedure have smaller D-efficiencies for the interaction model than D-optimal designs, but standard errors for the main effects in this model are improved. Generated OAs for 7–10 factors and 32–72 runs are smaller or have a higher D-efficiency than the smallest OAs from the literature. Designs obtained with the new optimal design procedure or strength-3 OAs (which have main effects that are not correlated with two-factor interactions) are recommended if main effects unbiased by possible two-factor interactions are of primary interest. D-optimal designs are recommended if interactions are of primary interest. Supplementary materials for this article are available online.     

Capitalizing on the Koran to fuel online violent radicalization: A taxonomy of Koranic references in ISIS’s Dabiq

The current study set out to investigate to what extent ISIS is bolstering its jihadist ideology on a ‘cut-and-paste’ or ‘cherry-picked’ version of Islam in their renowned online propaganda magazine Dabiq. The main objective was to examine in a systematic and quantitative way to what extent ISIS utilizes the Koran in an atomistic, truncated and tailored manner to bolster its religious legitimacy. A total of 15 issues of Dabiq and 700 Koranic references were scrutinized. By means of a quantitative analysis we developed an innovative taxonomy of Koranic chapters and verses (i.e. surahs and ayat, respectively) on the basis of their appearance in Dabiq. Our large-scale data analysis provide consistent empirical evidence for severe decontextualization practices of the Koran in three ways: (1) a thin, Medinan-dominated religious layer, (2) ayah mutilation, and (3) clustered versus exclusive mentions. Limitations and implications for future research, policy makers and CVE initiatives are discussed.     

Temperature-induced impacts on groundwater quality and arsenic mobility in anoxic aquifer sediments used for both drinking water and shallow geothermal energy production

Aquifers used for the production of drinking water are increasingly being used for the generation of shallow geothermal energy. This causes temperature perturbations far beyond the natural variations in aquifers and the effects of these temperature variations on groundwater quality, in particular trace elements, have not been investigated. Here, we report the results of column experiments to assess the impacts of temperature variations (5°C, 11°C, 25°C and 60°C) on groundwater quality in anoxic reactive unconsolidated sandy sediments derived from an aquifer system widely used for drinking water production in the Netherlands. Our results showed that at 5 °C no effects on water quality were observed compared to the reference of 11°C (in situ temperature). At 25°C, As concentrations were significantly increased and at 60 °C, significant increases were observed pH and DOC, P, K, Si, As, Mo, V, B, and F concentrations. These elements should therefore be considered for water quality monitoring programs of shallow geothermal energy projects. No consistent temperature effects were observed on Na, Ca, Mg, Sr, Fe, Mn, Al, Ba, Co, Cu, Ni, Pb, Zn, Eu, Ho, Sb, Sc, Yb, Ga, La, and Th concentrations, all of which were present in the sediment. The temperature-induced chemical effects were probably caused by (incongruent) dissolution of silicate minerals (K and Si), desorption from, and potentially reductive dissolution of, iron oxides (As, B, Mo, V, and possibly P and DOC), and mineralisation of sedimentary organic matter (DOC and P).     

Engineering the Rural Idyll: Road Construction and the Peri-urban Landscape in Belgium, 1925–1940

As in many other Western countries, the road network in Belgium was subject to an extensive modernisation project during the interbellum period. This paper analyses how this project affected the relationship between the road and landscape. In the absence of a comprehensive landscape project for road construction from the government, other parties played an important role in defining the road's relation to the landscape. Through their publications, images and discourses, an idealised image of landscape—a rural idyll—became interwoven with the narrative of the modern road. We will first position this Belgian project vis-à-vis other road projects abroad, and describe why landscape was a non-issue for the Belgian government and its engineers. Subsequently, we will examine how other parties—the road association, the construction industry, urban planners and architects—appropriated fragments of landscape to frame or support their own projects.     

Substrate Activity Screening (SAS) and Related Approaches in Medicinal Chemistry

Substrate activity screening (SAS) was presented a decade ago by Ellman and co‐workers as a straightforward methodology for the identification of fragment‐sized building blocks for enzyme inhibitors. Ever since, SAS and variations derived from it have been successfully applied to the discovery of inhibitors of various families of enzymatically active drug targets. This review covers key achievements and challenges of SAS and related methodologies, including the modified substrate activity screening (MSAS) approach. Special attention is given to the kinetic and thermodynamic aspects of these methodologies, as a thorough understanding thereof is crucial for successfully transforming the identified fragment‐sized hits into potent inhibitors.